rs250473493 SNP Detail

Summary

• ID
  rs250473493
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171287532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGTTGTG TGATCTTGAA
  CACCTGTCTT TACTTGTAGT CTGAGTTCCG CGTGTAAAAT TAGGGTAATA ACTCTTGTCC
  TGCTGATATG TGGTGCTTGT TTCAAGGATC AAACAGTGTT AACATCTCTG AAAACACCCC
  GAAGAGCGGC TAATGTTGTA CAAATGTCAA GTTGCCTGTT CTATCCTCAT CCTACCTCCA
  Y
  CCCACCCCCA CTTGCCTCCA GCTTGCTGGA TCCCTTCCAA GATTGTTTTG ACAAGTGGCT
  GCACTCTTTT GTGGAGCTTT CTCTGAACCA TGAAATGTCA TTCTGGAAGC TCCCTTTGGA
  CAAGTAGGGA TTTAATTAGA GTATTGAGAG CCATAGAGGA AGCCGTTAAA AATAGGAGAA
  GTTGTATTTG AAATGCAGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320119049	CHEV_1_173390095	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250473493					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171287532 () rs orientation: forward

Symbol	Name	Function Class
F11r	F11 receptor	within coordinates
Rr31965	regulatory region 31965	within coordinates
Tssr10057	transcription start site region 10057	1845 bp downstream
Tssr10058	transcription start site region 10058	1605 bp downstream