rs250510459 SNP Detail

Summary

• ID
  rs250510459
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91455997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGAGTTCTG CTTTTGAGTC TCCCAGGACT
  CCATACTAGC ACTGAGCAAA GGACAACTAT GAATTTTTTG GTGGGTATTT TATAAATAGA
  ATGAGGCCTA AAATGGTTAA ATTGCCATTT TCATTTCTAC CTGAGGGTGT CATGTTAGCC
  M
  GTGTCCTTGT AAGGTGCCTG TCACCTGGGC GGGGTTGCTG CTCTCTTATT GTATAGGCTT
  CTTTCTGCAG CCTCCCCATG ACCCTGCTGT CTGCATTTCT AGCCCTGAAA GCTCATAGGT
  TGAGAAGGAG AATTTAGCCC AGCCTTTATG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319840930	CHEV_1_93424852	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250510459					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91455997 () rs orientation: forward

Symbol	Name	Function Class
Rr23655	regulatory region 23655	397 bp distal
Rr35283	regulatory region 35283	1605 bp proximal
Traf3ip1	TRAF3 interacting protein 1	within coordinates
Tssr8094	transcription start site region 8094	239 bp downstream