rs250567251 SNP Detail

Summary

• ID
  rs250567251
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70410936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCGAGGCC TTCAACAAGG TGACCGACCT CGAGGCTCGT
  GTGCACGGCC CCAATGCTTC ACACTACACA TCGCTGATGA CTATGATCAC ATGGGAGCGG
  S
  GAGCAGGATT GCTACAGCGC CCGGGAACCG AACCTGGGCA TTCAGCCGGG TCCTCGGGCT
  CTCGAACGCT ACTTTTGTTG CATCGCGCGC TGCGCTGGT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323735935	CHEV_11_70333612	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250567251					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70410936 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3187	CpG island 3187	within coordinates
Gltpd2	glycolipid transfer protein domain containing 2	within coordinates
Rr450318	regulatory region 450318	904 bp distal
Rr450319	regulatory region 450319	109 bp proximal
Tssr102724	transcription start site region 102724	949 bp downstream
Tssr102725	transcription start site region 102725	935 bp downstream
Tssr102726	transcription start site region 102726	907 bp downstream
Tssr102727	transcription start site region 102727	470 bp downstream