rs250574489 SNP Detail

Summary

• ID
  rs250574489
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110674074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCTGAGC CATCCCTCTG
  GCCATCAAGG ACTTGTATTT TAAAAGAGAA AAATCAAAAG TTAATTCCAA TGGCATAACC
  TTCCTCCCCA CAAATGTACA TGGCACAGCT AGTGGAAAAT ATTTTCCTCT GGCCACTGGG
  AGTTACTCAT TTGAACCCAG CCCCACAACT GCCTAGTAGT GTGCTGTTGC CCCCCCCCCC
  G
  CAAAAAAAAA AAAAAAAAAA AAAGGAAGAA AGAAAAAGAA AAAAAAGTGT AAAATTATAT
  GCATATAGGT ACACGGCATT CATGCAGTGC CCTTGAAGTC CAGCAGAGGG CGTTGGATCC
  CTCCTTTCCC AGACGACTTG CGGACCATTG TGAGACACAG TGGGTGCTGG GAAGGGAACC
  TGGGTCTTCT GCAAGAGTAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	C57BL/10SnJ	CZECHII/EiJ	MOLF/EiJ	PWK/PhJ	WSB/EiJ
ss376006438	MGP_WTSI_8_112471342	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	C57BL/10SnJ	CZECHII/EiJ	MOLF/EiJ	PWK/PhJ	WSB/EiJ
rs250574489					SNP	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss376006438	MGP_WTSI_8_112471342	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110674074 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21023	CpG island 21023	574 bp proximal
Marveld3	MARVEL (membrane-associating) domain containing 3	472 bp downstream
Rr669766	regulatory region 669766	1407 bp distal
Rr669767	regulatory region 669767	808 bp distal
Rr669768	regulatory region 669768	96 bp proximal