rs250577168 SNP Detail

Summary

• ID
  rs250577168
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:90052398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCACCTTC AGTTTTCATA
  GGAAAGAGGG GGCTCTATTT AACCAAAGCC TGATTATCAA AACCTATAAT TACATTTGGT
  TAAAAAATTC TTAAGTGCCT ATGAGTTTGT GGAAACTGTG CAGAAAAGCT TAGCATCGAA
  TTAATCAGAC TATAGGTCTC CCATCAGACC GAAATCTTCT TTTTAAATTG GAAGCGCAAC
  Y
  CCCAGCCTCC CCCTCTACTC CTTTTGAATT CACCAATTCT TCTATAATTT AATTGGACAA
  ATCTTAACTG TGATTTTTTC CCCCTCCTAA AGAGGGGCAC ATTGCGGCCA AGGCTTGTTA
  ATTAAGGTCT TTAAATGCCC CCAGCTGTGC AATAAGTTTT CAAAGCAACA CAACTGCAAA
  TTTATTTTTC TTTTTAACAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322772671	CHEV_8_91849669	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250577168					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:90052398 () rs orientation: forward

Symbol	Name	Function Class
Rr406537	regulatory region 406537	592 bp distal
Rr667317	regulatory region 667317	within coordinates