rs250667054 SNP Detail

Summary

• ID
  rs250667054
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72307080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCCTGGGAC TCGCCGCTGG CCATCCTGTC
  TGGCGGTCGT ATCCCAGCCT TCCACCTTCT GGGACCTCAC CCTGCACGAC CCGCTGGCGG
  CGAGTGCGTT GTTACCTACG CGTGCACTAG TGGCCCTGGG ATCGATCCTC TTTTGCTCTG
  M
  GTCCCCTTCT AACCACTCTG GATCTGCGGG TTTAGCGTAG ATGGCCTTGT GAGCATTTCT
  TGAGAACTTG GGTTGTGCAC GTGGGGGGAG GTATTGTTTT AGTCCTAGGC TGTGGTCAGA
  TGCAATTTTG GGGCCCAGCG ATGCAAGTCG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320342590	CHEV_2_72314793	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250667054					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72307080 () rs orientation: forward

Symbol	Name	Function Class
Cdca7	cell division cycle associated 7	within coordinates
Cpgi11756	CpG island 11756	within coordinates
Rr397036	regulatory region 397036	670 bp downstream
Tssr18351	transcription start site region 18351	736 bp downstream
Tssr18352	transcription start site region 18352	524 bp downstream
Tssr18353	transcription start site region 18353	512 bp downstream
Tssr18354	transcription start site region 18354	477 bp downstream