rs250678347 SNP Detail

Summary

• ID
  rs250678347
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:56265384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGTGCCTTT GGAGTTAGCT
  CACCAGCAAA TCCTCCAGCC GGGGCCGGTT CTATCCCACT GGCCAGGTGA GGTGCAGGGC
  CTGCCCTCCC GAGTGCTGCA GCAGGTGAGG GGCAGGGAGA GCTTTCTTGT TCTGATGACC
  CCAAGGCCAG GGCTTCCATC TGCCCTGGTG GTGAAGGATA GAGGGTAAGA GGGTAGGAGG
  K
  TGTCTCTCTC CCTCATCCAT GCCACCACAT AGAAGATGAG CAGTAGGGCC AGCTCTCTCA
  CAATGCCCCG GTAAGGGGGT AGAGCCAGTT CCACACAGTC TTCAGACATC AATAGGTAGT
  AGATCAGACC AGGGACATCT GCCTGTTCTT TGGTGGTAAC AGATATCTGC TGCTGCAGGA
  CTAGGGATCC AGATGTGGCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325856835	CHEV_19_56351442	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250678347					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:56265384 () rs orientation: forward

Symbol	Name	Function Class
Gm22271	predicted gene, 22271	566 bp downstream
Gm32257	predicted gene, 32257	within coordinates
Rr549993	regulatory region 549993	400 bp proximal
Rr549994	regulatory region 549994	630 bp proximal
Rr549995	regulatory region 549995	1050 bp proximal
Rr549996	regulatory region 549996	1076 bp proximal
Rr549997	regulatory region 549997	1140 bp proximal