rs250683490 SNP Detail

Summary

• ID
  rs250683490
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52465442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    catctatga tgtctatgaa ccatatcagc
  gtctaaccat tctacaataa tgctaaggat acagcatggc atgtgtacct tgatggtaac
  caacagctcc ctaattggac ttaagactta ctcaacaaga gggaaatcat ttctagtact
  R
  ggacatgtag ccgattcccc agggcttggt ggatcttgaa ggcaaaccaa caaccactat
  tttactaaaa ctgcataatc tttaactaca tgccaaatat ttgtctttat acccacagac
  agataagtgc agtcctcatt tatcaagcaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319720158	CHEV_1_52483127	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250683490					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52465442 () rs orientation: forward

Symbol	Name	Function Class
Gm69377	predicted gene, 69377	1136 bp upstream
Rr410861	regulatory region 410861	1956 bp proximal