rs250822054 SNP Detail

Summary

• ID
  rs250822054
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192806272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAATGAAAA TCATTTTGTG AAATTTATGG
  GGTATGGTAG Agctggggaa agaggagggg agtttcagac catcctggtt aacatagcaa
  tttccaaaca gctaagccta cagagtgaaa ctgttacaaa aaTAAAGTAA TTTACACATA
  M
  TTAAATGTTG ACAAAACCAA ACACTGGTGC TCACTGCTtt cattcattca ttcattcatt
  cattcattca ttcattgagg cagtttctct gcgtagccct ggctgtccta gaattccctt
  tgtagatcaa gctggcctca aacttaagga                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320200887	CHEV_1_194950158	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250822054					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192806272 () rs orientation: forward

Symbol	Name	Function Class
Rr15354	regulatory region 15354	1929 bp proximal
Rr367086	regulatory region 367086	898 bp downstream
Utp25	UTP25 small subunit processome component	within coordinates