rs250869098 SNP Detail

Summary

• ID
  rs250869098
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24242660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTTTGACA GAATCTATTT
  CGCCAATGAG AGAATGTCAA GAACACAGTG ATATTGTACA CTATTTTTCC TCTGGATTTG
  AACTTATTTA AAATGAACTC AAGATTTATA GCCAAGCTAC AGTGAAAAGT TTGGTAAATG
  TCCTATGGAA CATACTTCCC ATATATTTCC AAGGGTATTG GTTTATAGCA AAACATGAGC
  R
  GCTTGGTGCA CATGGATGCA GTTTCTTTTG TTCCCAGAAA AGTCCTTTAT TGAATCTCCG
  AAACTTAGGA TTTCCATATC AAGTAACCAC TCATGGGGCA TCGGCTCCTT TAGCTCTTTG
  GGTGAGGCCA CAAAGCACAT AATGAAGAGC TTTGTTACAG CCACCAAAGG GAATCTTTAA
  AGGCTGAGCA TGGTGGCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294188	CHEV_13_24150546	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250869098					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24242660 () rs orientation: forward

Symbol	Name	Function Class
4933427I18Rik	RIKEN cDNA 4933427I18 gene	748 bp upstream
Carmil1	capping protein regulator and myosin 1 linker 1	within coordinates
D13Ertd224e	DNA segment, Chr 13, ERATO Doi 224, expressed	567 bp distal
Tssr121764	transcription start site region 121764	612 bp downstream
Tssr121765	transcription start site region 121765	643 bp downstream