rs250873279 SNP Detail

Summary

• ID
  rs250873279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185417805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCAGAGG GATTCCGGCA
  AGGATCCTTC CCCCAGAGCA CCCCTGCAGG CTTCCCCCAT GCCCCAGTGA TAGCAGGAAG
  GATGTGGTGA CAGGCAGGGA TGCAGGGGCA CTGGGGACTC AGCACCAGCA ATTTGGTAAA
  ACAACCCCAG AAGGCCTGTG CTCCTGTCTT AAGTATTGTG AAGAGAGCTT AGTAGTTTCA
  R
  CTAGGCAGAC ACAGGGTGGA ATCAATGAAG ATGTAAGGGG AGCTTAACTC TCCAGTAGAA
  CATTTACCCA AAGACATTTC AGAATTTAAG TTGTGACCCT TGGCTCCCTC CCCTACCTTT
  CTCCCCCAAC TCCCTGCCCT GTTTCCCCAT TCCTTCATCT TATTTTTTCC TTTCTCCCTT
  TTCCTTTTCT TTATCTCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320178645	CHEV_1_187509487	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250873279					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185417805 () rs orientation: forward

Symbol	Name	Function Class
Rr425422	regulatory region 425422	789 bp distal
Rr425423	regulatory region 425423	601 bp distal