rs250874352 SNP Detail

Summary

• ID
  rs250874352
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24244953 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTAAGACT TGACCAGCAA
  ACAGTACTTC TGCCTCTTTA CCTGTTTCAT TGTTTATTCT AAAACAAGGA CTTATGTAGC
  CCAGGGTAGC CTAGAATCAC CAAACCTACC TTTCACCTTC TAAATGTTGG GATTACAGGC
  ATGTGCTACT ATATTGCAAT CCTGGGTTTA CTGAGGGCCA GCAGCCATCT CTCCAGTCTC
  K
  CCTTCATCCA TGACCCAAGT AAGAGGTCTC CATCAAGGAT CTCCCATCTT CCTCTCATTT
  GATGGGCATA CCCTTTCACT GTACACCAAG TTTACTCTTA GAATCTATAG ACAGTCCTTT
  CCCAAATTCA AATATTGTTG AATTCAGGAC CAAGACAAAA ATCTTTGCCT CACAAGGTAT
  AGTGGGTACA CAGTGATAAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294214	CHEV_13_24152839	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250874352					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24244953 () rs orientation: forward

Symbol	Name	Function Class
4933427I18Rik	RIKEN cDNA 4933427I18 gene	within coordinates
Carmil1	capping protein regulator and myosin 1 linker 1	within coordinates
Rr475992	regulatory region 475992	1832 bp proximal
Tssr121764	transcription start site region 121764	1657 bp upstream
Tssr121765	transcription start site region 121765	1646 bp upstream