rs250917874 SNP Detail

Summary

• ID
  rs250917874
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57921971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGgccgggc gtggtggcgc atgcctttta
  tcccagcact tgggaggtag aggcaggtgg atttctgagt tggaggccag cctggtctgc
  agagtgagtt ctaggacagc cagggctaca cagagaaacc tggtctcgaa aCCCCCCCCC
  M
  AAAAAAAAAG AAAAGAAAAA AAATGGGTGT CAGAGTGCAT ATCTTTAACC CAGTGGCTTG
  GTAGGTGCAT GGTTGGTGGG ATTGGCTTGG GATGGGAGTC AGATCCCTTC CACTTTTTTT
  CTTTTTTGAG TCAGGGTTTA GCGCCAGACT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323687351	CHEV_11_57844647	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250917874					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57921971 () rs orientation: forward

Symbol	Name	Function Class
Gm51897	predicted gene, 51897	within coordinates
Larp1	La ribonucleoprotein 1, translational regulator	within coordinates
Rr386121	regulatory region 386121	358 bp downstream