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rs250918832 SNP Detail
Summary
  • ID
    rs250918832
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr19:42268138 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      tttcaggat ggagtaagga ttaatgcaga
    catctatgca gtttttggca tatagtgggc attccgtaaa tgttaactTC TCCCCGAGGA
    TGCTCTTGTG TCTTCTTGCT TCTCATTTCT CCTCTGATGG TCTACCCTCT GACTGAACCA
    Y
    TGTTCCACAG TGCTGTGTAA GAGGGCAGAG CTGCTGAGGG CAGAGGACAG TGGGATTATC
    TGTCCTGTTA ACTAGCCCTA GCTGCCTGCC TCCTTCTTCC TCCTTCCAGG ATGTTCCTGT
    TGCCAAGGAA ACACAACCTC AGCCCTTGGC                                 
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss325811989 CHEV_19_42354189 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs250918832 SNP C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr19:42268138 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm34347 predicted gene, 34347 within coordinates
Mir3085 microRNA 3085 383 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory