rs250967183 SNP Detail

Summary

• ID
  rs250967183
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44390213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGAGGAGGG GGGAGGGGGA AAGCAAGGAG
  CTGGGGGAAG CAGACTGCAG GGAGACAGCG CCTGGAACCC CCTCCCCAGG GACCTGGCCC
  TGGGCCCCCA GCCCCAAAAG GGGCCCTGCC CTCCCCGGGG TCGCGCTCTC TTCCCCCCCC
  M
  CGCCCTGCCC CCGCCCTTCA GCTTTGTGTC CCCAGGAGGG TGGGCTGCAA GATTTCCAGC
  CAAGCCTTGG CTGCCTGCTC AGTTTTTCCA AACCCTCCAG TCGGAGAAGG CGGGAGCCTT
  GTCAGGATAA GAGTCCCTCC CCCCTCTGCC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322940983	CHEV_9_44286999	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250967183					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44390213 () rs orientation: forward

Symbol	Name	Function Class
C030014I23Rik	RIKEN cDNA C030014I23 gene	within coordinates
Cpgi21659	CpG island 21659	182 bp distal
Cpgi21660	CpG island 21660	240 bp proximal
Cpgi21661	CpG island 21661	991 bp proximal
Gm10023	predicted gene 10023	within coordinates
Gm47204	predicted gene, 47204	within coordinates
Rr368728	regulatory region 368728	1160 bp upstream
Rr677665	regulatory region 677665	447 bp distal
Rr677666	regulatory region 677666	922 bp distal
Rr677667	regulatory region 677667	within coordinates
Rr677668	regulatory region 677668	446 bp proximal
Rr677669	regulatory region 677669	871 bp proximal
Rr677670	regulatory region 677670	1334 bp proximal
Tssr89164	transcription start site region 89164	808 bp downstream
Tssr89165	transcription start site region 89165	836 bp downstream