rs250967777 SNP Detail

Summary

• ID
  rs250967777
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96321742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTCTAGA GATCCACCTG
  ACTCTGCCTC CTGAGTGCTG GGATTAAAGG TGTGTGCCAC CATATCCGGC TGCCCTGTTT
  CTTAATCATC TCATCAGCCT GACTAGACAG ATAGGCATTA TTGACCAGGC TTAGAGAAGG
  TGTTTAAACT ACCGGTGCCA CTGCAGGACT GTGATCATCA GGAAGACACT CTGATGGGTT
  T
  TGAGTGGGGA GACTGGCTGG ATGTCAGCCC AGTCCCTGTC CCATAGCCTG GCATCCCTCA
  TGAGGAGTCA GCTTGCCTAC CATCCGGCAT GCAGCAGCCA GGGGACAGGA CCAGGATTCT
  GCCACTCAAG GACTCTACTC CTCCATCCAG GACCACGCTT CACTTACCGG ATGTGATCAA
  AAGGATGCTC TAGGCTTCCT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323109007	CHEV_9_96340108	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250967777					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96321742 () rs orientation: forward

Symbol	Name	Function Class
BC043934	cDNA sequence BC043934	within coordinates
Cpgi22164	CpG island 22164	1470 bp distal
Gm50488	predicted gene, 50488	within coordinates
Gm68666	predicted gene, 68666	848 bp downstream
Rr368835	regulatory region 368835	1366 bp downstream
Rr684963	regulatory region 684963	1999 bp distal
Rr684964	regulatory region 684964	649 bp distal
Rr684965	regulatory region 684965	1851 bp distal
Tssr90963	transcription start site region 90963	1463 bp upstream