rs250999162 SNP Detail

Summary

• ID
  rs250999162
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13303243 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGGGCGT GCTCACGACA
  GACGGACAGA GCAGGGAATG CGTATGTGGG GTCTGTTGGC TCAACTGCTG GCCTCAGGCC
  TCAGTTTTGC AACGATGGCA TGCCAGACCT GCAGGGTATT ACCATCACAC TGTGTCGAGA
  AAAGACACAC GGCGCTTGTA TATGGGCGCG TCTCTGAAAT CCAGGTAACA TTTTGTTGAT
  Y
  TTAGCTCCTT AGGAAACAAG CTTTGTTCTT CCATGTCCAA AACTCTTCCT TAGACAATTT
  ACTCATAAAT TACGCCCAAA CTGGATCGCT CGGACAGACA GCTCAACCTT AATTATTTGG
  ATCGGAGATG CCACCCCCAA ACAATGTTAT CTCAGTGGGC CCACATTTCA AGCTCTTCTT
  TATAGACTTA GAATAAGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505536	CHEV_8_13253243	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250999162					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13303243 () rs orientation: forward

Symbol	Name	Function Class
Adprhl1	ADP-ribosylhydrolase like 1	within coordinates
Tssr80430	transcription start site region 80430	789 bp downstream
Tssr80431	transcription start site region 80431	825 bp downstream
Tssr80432	transcription start site region 80432	861 bp downstream
Tssr80433	transcription start site region 80433	878 bp downstream
Tssr80434	transcription start site region 80434	911 bp downstream
Tssr80435	transcription start site region 80435	933 bp downstream
Tssr80436	transcription start site region 80436	1003 bp downstream