rs251019030 SNP Detail

Summary

• ID
  rs251019030
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102337247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGTTGGGAC CCATGCTCTT TGAATTCCAT
  GACAATGTCA GAGCTGAGGA CATGGTTGAC ATTCTTCAGG GTGACACCCA GAAAATTATT
  GAAAATAGAC AGGACCAGCA CTGTAGGGGG AGAGGGAGGA ACTGAGATTT GAACTGAGCC
  Y
  CTGCTTCTTG GTAGAGACAA ATGACTGACC TTATGTCACA GTGAACAGAT GGATTCAAAG
  AAGACATTTA AAAAATACTA ATTGAGCATG CATACAAAGA GACCTGGATT GCAAGACTGG
  GTCATACATT CTCTGCCTTA AAGTCAACCA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322357793	CHEV_7_109836554	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251019030					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102337247 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	528 bp distal
Gm45527	predicted gene 45527	1821 bp upstream
Rr652623	regulatory region 652623	781 bp distal
Rr652624	regulatory region 652624	223 bp distal
Trim68	tripartite motif-containing 68	713 bp upstream
Tssr73953	transcription start site region 73953	742 bp upstream