rs251030638 SNP Detail

Summary

• ID
  rs251030638
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131645099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTTCCCT AGGGCACCTG
  CTGTCTCCAC AGCCTTTAAG TGGACAGGTC TGTTGCCCCA GGAACAGAGT GCCTGTAAGA
  GCGCAGAGAA GTAGCTAAAG AAAAGGACTG GCCTTTTCTT TACAGTGGGA GGGACTATAG
  GAAGTCCCAA GGTCCTTTAA GTGGTTAATA CTGTCTTCTT GGGGCTGGAG AGATGGCTCA
  K
  TGGTTAAGAG CACTGACTGC TCTTCCCAAG GTCCTGAGTT CAAATCCCAG CAACCACATG
  GTGGCTCACA ACCATCCGTA ATGAGATCTG ACGCCCTCTT CTGGGGTGTC TGAAGACAGC
  TACAGTGTAC TCATATATAA TAAATAAATA AATCTTTAAA AAAAATACTG TCTTCTTATG
  TTGTTCACGA GCAGGCATAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329077	CHEV_4_131473703	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251030638					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131645099 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14946	CpG island 14946	1025 bp distal
Cpgi14947	CpG island 14947	1923 bp proximal
Gm12992	predicted gene 12992	within coordinates
Gm68339	predicted gene, 68339	1397 bp downstream
Rr85750	regulatory region 85750	499 bp distal
Rr85751	regulatory region 85751	within coordinates
Rr100127	regulatory region 100127	1498 bp distal
Rr100128	regulatory region 100128	701 bp proximal