rs251038227 SNP Detail

Summary

• ID
  rs251038227
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99140959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATTACGAG ACAGTATGAA
  AACTGGGCCC AACTGGTAGG AATGGAGATT TATGAATGTA TAAGCATGAA TCTTTATATG
  AATTATGTGA GTTTAATCCA TATTTGCTTG TATAAAAGTT TTTCCTTCTG TGAGTGTGAT
  TCTCTTCTCC TGGTTCAATA CAAGTTTATT GCTCCAAACT TCCCCCTAGC CTGACAAGCT
  W
  AAGGCATCTG GACAAGAGGG AGAAGGCTCT AGCAGCTAAT CCTTTACTTA GTACCCTGTT
  GTTTCCTGAT GAGGTGTTAA ATGCCAGACT TGCAGTTTCT GACCTTAAAA GGACTCAGGC
  AGGTCAGCTA CAGTAGCTAA GTGACTTAGA CAGGTAAACG TTTTATTACA CAGCAACCCT
  AAATACCTCC TAAGATCAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135175	CHEV_9_99159325	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251038227					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99140959 () rs orientation: forward

Symbol	Name	Function Class
Cep70	centrosomal protein 70	within coordinates
Gm47199	predicted gene, 47199	569 bp downstream
Rr383815	regulatory region 383815	1156 bp downstream
Rr685374	regulatory region 685374	1592 bp distal