rs251042699 SNP Detail

Summary

• ID
  rs251042699
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:83182546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCCCAGG GTTACTTTAA
  AACACTGCAT CTTAACCAAG AGTTCTGGAG AAAATGCTGC TTGCCAAAGC CACTCTCCAG
  GGCTTCTCTG CCAGCCCTCT CTGCACAAAG GCTCCAGGAG AGGTAACCTG GCTCTCTGGG
  CTTCACACCC AACAGTGGCT GCTCTCAGAA ACACCTCCCA CAGCCCCAGA CCCAGCCTTC
  R
  ACGGGTTCCC AGCAGCTTCT GCCATGGGGT TCCTCTGTCT ATTCTAGACC TTGAATGATA
  GGCAAGCGCT CTGCTGCGGG GCCACGTTCT TTCTTATTTA TTTATTTACT GTTTGTGTTT
  TGCCTGCATG TATGTGTGGA TACCATGGGC ATGTAGTGCC CACGGAAGCC AGAAGAGGGT
  GCTGGCTTTC TTGGAACTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325036147	CHEV_15_83128775	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251042699					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:83182546 () rs orientation: forward

Symbol	Name	Function Class
Arfgap3	ARF GTPase activating protein 3	1394 bp downstream
Gm32788	predicted gene, 32788	1555 bp upstream
Rr304705	regulatory region 304705	within coordinates
Rr310865	regulatory region 310865	37 bp proximal
Rr314786	regulatory region 314786	947 bp distal
Rr314787	regulatory region 314787	455 bp proximal