rs251093191 SNP Detail

Summary

• ID
  rs251093191
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:64519339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAAGGAGC CTTCTCAAAG
  GATGGAGGCT GAACTTGTGC AGAGGCTTCT TCAGCAGTGG ACTCACCTGA TAAAGGTAGG
  ACCTGTCCAG GACTTTCCTT AGCTTGTGGA ACCTGAACTT CTGTGGGAAC ATCATGTGTA
  GGGCTCTCCT CAGTTGGTGG AGGTGGGACT TCTGCAAGGC CCTCTTCAGC TGCTGGAGAT
  W
  GAACTTCTAC AGGGGCCTCC TCAGTTGCTG GAGGTAGAAC TTCTACAGGG GCCTCCTCAG
  TTGCTGGAGG TGGAGCTTCT TCAGGTCTCT CTGCAGTTGG TGGAAGTGGA ACTTCAGAAG
  AGCCCTCCTC AGCTGATGAA GATGGTACTT CTGTAGGGAA CTCCTCAGCT GGTGGAGGTG
  GAACCTCTGC AGGCCCCTCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S5/SvEvBrd	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	QSi3/Ianm	QSi5/Ianm	RF/J	SPRET/EiJ
ss386272734	MGP_WTSI_12_65573552	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S5/SvEvBrd	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	QSi3/Ianm	QSi5/Ianm	RF/J	SPRET/EiJ
rs251093191					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss386272734	MGP_WTSI_12_65573552	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:64519339 () rs orientation: forward

Symbol	Name	Function Class
Fscb	fibrous sheath CABYR binding protein	within coordinates