rs251129507 SNP Detail

Summary

• ID
  rs251129507
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:69763281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA CCTGGGAGGC AGGGAGTGGG
  Y
  AGGGGTCATG CTTACATCGA TCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323355209	CHEV_10_69390199	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251129507					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:69763281 () rs orientation: forward

Symbol	Name	Function Class
Ank3	ankyrin 3, epithelial	within coordinates
Rr433505	regulatory region 433505	1308 bp distal
Rr433506	regulatory region 433506	within coordinates
Rr433507	regulatory region 433507	905 bp proximal
Tssr93971	transcription start site region 93971	1949 bp downstream
Tssr93972	transcription start site region 93972	1665 bp downstream
Tssr93973	transcription start site region 93973	1627 bp downstream
Tssr93974	transcription start site region 93974	1598 bp downstream
Tssr93975	transcription start site region 93975	1581 bp downstream
Tssr93976	transcription start site region 93976	1466 bp downstream