rs251158500 SNP Detail

Summary

• ID
  rs251158500
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:66951708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTATGAAGT AATGGCCTGG
  TGACTGAAAG AACAGAGAGA AGTATGGGAG GTCTCTGCAG TGCCTTAGTC CTCTTTATGT
  TAAAATGCCA CATAGAGTAT TAACACACTA CAGTCTCAGG TTTCCGGGAG GCCGATTAAG
  TGGAGAGGGA GGAAATGGTT AAAAAACTGA GGAGGGCTAA AGCCAGCTGG AGGCTCCTGG
  Y
  GAGGAGCTCT GTAGGTCTGG TAGGTTGCCA CTGTGCTGTG TGGAAGCAGG CTTACATCAG
  CCAAAGCAAA CGTTCCCCTA TCTTACTCTG GGTGGTGGCT GTAGCCTACT GAGACTGTGT
  AACCAGTAGG CTAATTCCCA TCTCGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT ATACGTACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323345119	CHEV_10_66578677	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251158500					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:66951708 () rs orientation: forward

Symbol	Name	Function Class
Jmjd1c	jumonji domain containing 1C	within coordinates
Rr215832	regulatory region 215832	908 bp distal
Rr215833	regulatory region 215833	1893 bp proximal