rs251163124 SNP Detail

Summary

• ID
  rs251163124
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:128615579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTCACAA GACCGCGTCT
  TGCGGGCCTT CTGCACTCCA TCTCCATGGG GGCCGGCCCC GGGCGAGCTT CATTCTCCTC
  ACGCTTCCTG CTAGCTCTTC TTTCTGCTCC TTCTCTATTC CTGTTGGCAA CCTGCATTCC
  ATGTGGGGCT ATGATGACAG CTAGAAACCT GCAATGTGAA GAGGTGAAAC TGAAGGAAGG
  M
  CACGCCTCCC CTGACTCAGT TTGAAGCCTT TGTGGTTGCA GACAGACTCA GTCAGGTGCT
  TGGTAAATGT TAGCTTGCCC CCATAGTCTG TCTGTCCTTA TGTGGCTGTA CAGATCTGGT
  GTGAGTGTGC CACTGTGGCC CTCTATGTCT GGCTGGCGTA CCTATTCACT CAGCTCGGTA
  GCTGTGAGAG TCACTGTGGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321306927	CHEV_4_128399030	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251163124					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:128615579 () rs orientation: forward

Symbol	Name	Function Class
Gm33712	predicted gene, 33712	within coordinates
Phc2	polyhomeotic 2	within coordinates
Rr600012	regulatory region 600012	1192 bp distal
Rr600013	regulatory region 600013	339 bp distal
Tssr39071	transcription start site region 39071	395 bp upstream