rs251178547 SNP Detail

Summary

• ID
  rs251178547
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:8615936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gctgtcact acagttagcc agtctgtcat
  cacatggtta ctatatataa aaacagactt gctgttgtac ttgcccaacc atgggctttc
  ctaagttttg agactattaa attgcagtag gctaagttct gatgcctgca gtttgtgtac
  W
  aaatgtggtt ttgacttaaa atgttttcaa catgctctga gattctccag acataaggct
  atcataacct caggagcagc tgCCATGCta ttctatgctt cccctataca ttcatgctat
  gataaagatt aacataaata agccacatgg                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321463529	CHEV_5_8565936	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251178547					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:8615936 () rs orientation: forward

Symbol	Name	Function Class
Gm72884	predicted gene, 72884	1117 bp upstream
Rr130297	regulatory region 130297	1465 bp proximal
Rundc3b	RUN domain containing 3B	within coordinates
Tssr45118	transcription start site region 45118	1157 bp upstream
Tssr45119	transcription start site region 45119	1177 bp upstream