rs251196617 SNP Detail

Summary

• ID
  rs251196617
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:118054359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAACCACTT GGACTCTTGA GCTCTGGGAT
  GGCTCTGGAC CTGTCAGGAG CTGTTGGGAC TCCCCACAGT GAGCAAGCAG GGTGTGAGCC
  CTGCAGTTAG CTTCCTGGGG GAAAGAGTGA GGTGTAGGTA CACTGCTGGT TTAGCCCAGA
  Y
  GGCACACGCA GGCAGGTCTG AACCTGAAGA GGAATGTGTT TCCTGCTTCT CTTGTCATCC
  GAGCACCATT GTCCCTAGCT GGCTGGCTCT GAGTGTGCCA GGAAAGAGAG GACAGGAGTC
  AGTGGGTCAT CGGGGACTAT GCCCTGCCCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322840374	CHEV_8_119851520	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251196617					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:118054359 () rs orientation: forward

Symbol	Name	Function Class
Cmip	c-Maf inducing protein	within coordinates
Tssr79599	transcription start site region 79599	1254 bp upstream