rs251203051 SNP Detail

Summary

• ID
  rs251203051
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:85303286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACAAGTGC TCTGAACGGC AGGGAGCTGT
  GAAAAAGAGT AAAGTAAGTG TACCCTCATT ACATGGAGGA CCTCGCCAAG GCTTCTACTC
  TTTAAAACAG GCTAAGGCTG AAAACACCGC ACACCATTAC AAAATGAAAA TACGCATTAA
  C
  GAAAACAAAT TATACATGAA ATGCATTGGG AAAGATAAAg gggctggaga gataggtcag
  cagttaagag caatgattgt tcttcaaaag gactggagtt cagctcccag tctgtcagct
  catagccatc tataactcca actacagggg                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319826358	CHEV_1_85322140	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251203051					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:85303286 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm2619	predicted gene 2619			Intron
				Noncoding-Transcript-Variant
Gm16025	predicted gene 16025			1164 bp upstream
Rr414357	regulatory region 414357			1773 bp proximal
Tssr137	transcription start site region 137			1143 bp upstream