rs251258315 SNP Detail

Summary

• ID
  rs251258315
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84936705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGC GCGCACAGAC AGACACGCGC
  R
  CATGCACACA CACACACACA CACAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322748152	CHEV_8_86733975	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251258315					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84936705 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20685	CpG island 20685	within coordinates
Gm26532	predicted gene, 26532	429 bp downstream
Mir23a	microRNA 23a	1484 bp downstream
Mir24-2	microRNA 24-2	1155 bp downstream
Mir27a	microRNA 27a	1318 bp downstream
Mir3074-2	microRNA 3074-2	1169 bp upstream
Mirc11	microRNA cluster 11, including Mir23a through Mir24-2	1155 bp distal
Rr178130	regulatory region 178130	496 bp proximal
Rr186984	regulatory region 186984	295 bp proximal
Tssr78378	transcription start site region 78378	1174 bp downstream
Zswim4	zinc finger SWIM-type containing 4	866 bp downstream