rs251294752 SNP Detail

Summary

• ID
  rs251294752
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:9112456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCGATGCC CTCGCGCACC
  AGCTCTTTCC GGTTGGCTGA GATGTTGCTT GCTCCGCCAC CATGGACTAC CACCACGAGA
  CTCACATCGA TGGAGGCTAG GCATCAGGAA GAGGCGAGTG TCATTTTGTA CCGGTCCAAG
  GGAACCAACT CAAGTGAGCA GCAGCGTCAA AGTTGTTTCC GTTCAGTGTC GTCCGTCCCC
  S
  CCCCCCCCCC CCCCCCGCTC AGTGAGAGTT TTGTTACAAA ACCCCAAAGC GACCCAAGCC
  TCCCAGCATT CCTCCCCATG CTCTCCCACT CCGACCTGGC AGGGGCATCT GTGGCTCAGA
  AAGCCTGGTG TCAAGACTCC GAGCCTGCGC TTGTGCCACA GCGCTACCCC TCAGCCTCAG
  TTTCCCCAGA GAACACCAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325718347	CHEV_19_9209582	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251294752					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:9112456 () rs orientation: forward

Symbol	Name	Function Class
Asrgl1	asparaginase like 1	within coordinates
Cpgi10592	CpG island 10592	within coordinates
Tssr154969	transcription start site region 154969	62 bp upstream
Tssr158099	transcription start site region 158099	41 bp upstream
Tssr158100	transcription start site region 158100	464 bp downstream
Tssr158101	transcription start site region 158101	511 bp downstream