rs251375103 SNP Detail

Summary

• ID
  rs251375103
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:41495921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGAGGCTC AGTGGGGTAA
  GCAGCAGCTT ATTCAAGGTC ACCCAGCTGA CTGACAAACG AAGACTGCGA ATATGGCTCC
  CGGAAGAATG CTTGCTTAGT ATTCAGCGCC CTGAGTTCTA GCTTCAACAC TGCCAAGAAG
  AAGAAACCAA AGAATTGGCA TTGGAGATGG GCATCGGGGG AGCCCCGAAG CTCTCCCCAG
  R
  ACCTTTCACC CAGAGAACAT TAAAGATTCG GGCACAGGCT CTGAGAGGGA AGCTGAGTTC
  TACTTCATTC TCCACCTTCT CTGGCAAGCC TCCAAGTCAG GAAAAACTCA CCCCACCATA
  GTTGGAGCTG ATCTCCTTAG AACAAGAGAA TTACTGAGAT GAAAGCCCTT ACCCCATGCG
  TGTGTTGGCA GGCATCAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321092830	CHEV_4_41442954	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251375103					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:41495921 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14157	CpG island 14157	1468 bp proximal
Myorg	myogenesis regulating glycosidase (putative)	within coordinates
Rr590654	regulatory region 590654	1042 bp distal
Rr590655	regulatory region 590655	within coordinates
Tssr41339	transcription start site region 41339	398 bp downstream