rs251471409 SNP Detail

Summary

• ID
  rs251471409
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117642877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTTTT TTTTGTTTTT
  TTGAGACAGG GTTCCTCTGT ATAGCCCCGG CTGTCCTGGA ACTCACTCTG TAGACCAGGC
  TGGCCTTGAA CTCAGAGGTC CACCTGCCTC TGCCTCCCAA GTGCTGGGAT TAAAGTTGTG
  TGCCACCACG CCTGGCTAGC AATGGCTTCT TATGTTTTAA CCTTGGGACT CTCCTTGTAG
  K
  TTTTCATCCA TGTTAAACTC TTCGAGTATT TACGTTGATT TACATTTCTG TGGCTATTGG
  CTAAAACACC CATTTATGGG CCAATCGAAT TTGTTTTGCG TTTCTATTTT CTTATGCTCC
  CTTATGTGTA AGAGCGCGCT TTCCTGCATG TACTCAATGT GTGTACCTGG GGCCCAAATG
  AGGCCAAAAG ATGTTAGGTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499643	CHEV_10_117244028	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251471409					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117642877 () rs orientation: forward

Symbol	Name	Function Class
Gm67590	predicted gene, 67590	within coordinates
Rr218193	regulatory region 218193	1477 bp distal
Rr218194	regulatory region 218194	924 bp proximal
Rr218195	regulatory region 218195	1523 bp proximal
Rr221673	regulatory region 221673	497 bp distal
Rr225990	regulatory region 225990	1877 bp distal
Rr385360	regulatory region 385360	228 bp downstream
Rr402273	regulatory region 402273	1109 bp upstream