rs251488143 SNP Detail

Summary

• ID
  rs251488143
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:90651498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACCACGAC CATGGCAAAT
  CTTATAAATG AGAGCATTTA ACTGGGGCTG GCTTACAGTT CAGAGGTTCA ATCCTTTGTC
  GTCATGGCAG GAAGCATGCC AGCATGCAGG CAGACATGGT GCTGGAGAGG AACTGAGAGT
  TCTACATGTA AATCCATGGA GAGTGGGGGG TGGCAAAAGC TGTAGGCCTG GCTTGGGCTT
  M
  TGAAACTGCA AAGCCCAACC CAAGTGATGC ACTTCCTCCA CCAACAAGGC CACATCTACT
  CCAAAAAGGC CATATCTTCT AATGTTACTC CCTAAGCATT CAAATACATG AGCCTATGAG
  GGCCACCATG CCTGTCTACC CAAGATGGGG TTTTCCCACT AATTCTGTCA GTTGTAAGAA
  TGCGTGGAGC CGTGAGTGAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320391260	CHEV_2_90661311	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251488143					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:90651498 () rs orientation: forward

Symbol	Name	Function Class
Agbl2	ATP/GTP binding protein-like 2	within coordinates
Rr373531	regulatory region 373531	1468 bp upstream
Rr560574	regulatory region 560574	2000 bp proximal