rs251490701 SNP Detail

Summary

• ID
  rs251490701
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:88277453 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGGAAGCT TTCTCATATG
  CTGTTATTGC TGCTACTAGG ATGTTTTGGC CCTTAGTAGT TTTTGGAAAC CAGTCACAAC
  AGAGGTCAGT TAGAGCTGCT TTGTACATTT AGCCACAAAA AGCTTGGACC CGAACCAACT
  TCCAGACAGC ACTTCCTGTA CCTGTATATG AGCTTTTATG GTCTTTGCCT TTCTAAGCTG
  Y
  CCCTGGGATG GACCCCAATA TAAGAGAGAC AGCTGCACCA ATATAAGAAC CCATTTAGGA
  TAAGACTTCT GGGGGCTGGT GAGATGTCTC AACGGTTAAG AGTGCTGACT GCTCTTCCAA
  AGGTCCTGAG TTCAAATCCC AGCAACCACA TGGTGGCTCA CAACCATTTG TAATGAAATC
  TGATGCCGTC TTCTGGAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325500517	CHEV_17_88369365	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251490701					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:88277453 () rs orientation: forward

Symbol	Name	Function Class
Gm50041	predicted gene, 50041	805 bp upstream
Rr333904	regulatory region 333904	1053 bp distal
Rr343663	regulatory region 343663	454 bp distal