rs251529115 SNP Detail

Summary

• ID
  rs251529115
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61359852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCAAGG GTCGGCTCCC
  GGGGCTGCGC AGCAGACAAA CGACAGTGTA TGAGAACTCT TACTTTATCG CCGCACTTGG
  GATTATTGTT GCCCTTTGCA TATTTATTCT GGGACCGCCT GCAAATGCCC AGCAACCCAA
  GAGAGCCATC TCTTCTGCAG AGAAGAAATG GGGTGTCGCT GCCACTGTCC CGGAGAGTGC
  Y
  AAGGGCTTAG AAGACAGTCA CTGGCAATAA CGAAGCTCCA GAAAGATTCC CAGAAGAGGT
  GTGGAGGGAA CCAGGCTTGA AGCAAGTCAA GAGTTTGAAC AGAGTGTGGA GGGGAGGGTA
  GAAGGGGGCG GGGATGTCAC TGTAACACAC TGTCTGTCTG TCTTTGTGAA TTAGGATTTT
  ATCACAGTCT GTCTTCTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323328683	CHEV_10_60986821	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251529115					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61359852 () rs orientation: forward

Symbol	Name	Function Class
Lrrc20	leucine rich repeat containing 20	within coordinates
Rr215563	regulatory region 215563	1052 bp distal
Rr215564	regulatory region 215564	1749 bp proximal