rs251551863 SNP Detail

Summary

• ID
  rs251551863
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121305617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCATCTAAA TTAAGGGGGG GAGCCCCAAA
  GATATACATA AAAATAAGAA GTTCAAGTTA GAACCCCTCA GAGTTTGTAA ACAACTATGC
  ACTAAATGTT AACCTGAGAG AAACAGAAGT GTCTACCTTT AGCAAATTCT gccgagtgtg
  M
  tggctcacac ctttaatccc agcaccgggg aggcagagac aggcagattt ctgagttcga
  ggccagcctg gtctacaaag tgagaaaccc tttacagaga aaccctgtct cgaaaaaaca
  aaacaaacaa acaaacaaaa acaaaacaaa                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320483290	CHEV_2_121300872	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251551863					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121305617 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12161	CpG island 12161	980 bp distal
Gm75774	predicted gene, 75774	within coordinates
Mfap1b	microfibrillar-associated protein 1B	1113 bp upstream
Rr563832	regulatory region 563832	1923 bp distal
Rr563833	regulatory region 563833	1037 bp distal
Rr563834	regulatory region 563834	705 bp distal
Tssr25938	transcription start site region 25938	1099 bp upstream
Tssr25939	transcription start site region 25939	1088 bp upstream