rs251605392 SNP Detail

Summary

• ID
  rs251605392
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54443249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAA CTCTAAGTCC AGTGGCAGAG
  R
  AACAGGCTTG CTAGTGGGAA GAGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322964811	CHEV_9_54383772	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251605392					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54443249 () rs orientation: forward

Symbol	Name	Function Class
Gm54935	predicted gene, 54935	1220 bp upstream
Gm69041	predicted gene, 69041	within coordinates
Rr679144	regulatory region 679144	1809 bp distal
Rr679145	regulatory region 679145	240 bp proximal
Rr679146	regulatory region 679146	1136 bp proximal
Sh2d7	SH2 domain containing 7	within coordinates
Tssr85159	transcription start site region 85159	1838 bp downstream