rs251688201 SNP Detail

Summary

• ID
  rs251688201
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:47884918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCC AAAATCCGTT AAGAAGAAAA
  Y
  TGGTACAAGC TAAAAGCAGT AAACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324597820	CHEV_14_48267136	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251688201					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:47884918 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6388	CpG island 6388	1323 bp proximal
Ktn1	kinectin 1	1633 bp upstream
Rr297095	regulatory region 297095	882 bp proximal
Tssr125321	transcription start site region 125321	938 bp upstream
Tssr125322	transcription start site region 125322	986 bp upstream
Tssr125323	transcription start site region 125323	1641 bp upstream
Tssr125324	transcription start site region 125324	1832 bp upstream
Tssr128337	transcription start site region 128337	1753 bp downstream