rs251766984 SNP Detail

Summary

• ID
  rs251766984
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:119723723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTACTGTG TGACTCTGTG
  TGTTTAAAAC TGCAGAAGGT GTGAGCTTGT CTGTAGTCAG GGCAGGCAGA TCAACTATTG
  GGGCAGGCAA GGAAGGGGCA GGATTTACAA AGGACACGAA CATGCAGGAG CTAGATTCAC
  CCTCGATGGT GGTAGCCTCA CAACACGCAT GTGCCTGGGT TTTGGGGTCT GAGCTGTAAG
  Y
  CTGTGCCATG TCTTGGCATC TTATAGACAA TGGTGTGGAT ATTGACAGTG ACCTGTTCTG
  TTTCCACCTT GATTTTCAAT CAGAAAGTGG GCTTGCTATT CTTCATTAAG ACTGATGCTG
  CGAGGTGACC TAACACTGCC CTGGAACTGA ACCTAGACCA AAGCCAGAGG CTGTGACATG
  TAGTTGAATC TGAGCATAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss384932088	MGP_WTSI_11_119694211	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs251766984					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss384932088	MGP_WTSI_11_119694211	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:119723723 () rs orientation: forward

Symbol	Name	Function Class
Rptor	regulatory associated protein of MTOR, complex 1	within coordinates
Rptoros	regulatory associated protein of MTOR, complex 1, opposite strand	within coordinates
Rr239370	regulatory region 239370	1723 bp distal
Rr239371	regulatory region 239371	within coordinates
Rr246287	regulatory region 246287	1077 bp proximal
Rr249008	regulatory region 249008	923 bp distal
Rr369474	regulatory region 369474	1400 bp upstream
Tssr112235	transcription start site region 112235	1450 bp downstream
Tssr112236	transcription start site region 112236	1511 bp downstream
Tssr112237	transcription start site region 112237	1564 bp downstream