rs251797312 SNP Detail

Summary

• ID
  rs251797312
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:151925939 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGGGAAGC CCGGAGCTGC TCTAACCACC
  TGCCTggctt ggaactcaat agggtagctc tgggtctgtg acttgtacca tgaccttggg
  caagtgactt cccttctctg gtcctcagtc tccccacaaa tgcaagagtt tagatgtgat
  S
  aactaagtaa gcatccttcc aagtttggca agctctgttt ctgtgGAAGG TTAACTAATG
  TGGAAGACAC TGGGTCTAAG GGAGTGCTGA GATCCGCTGT CATGGTTTTC TTGGGGGTTC
  TCTTCAACCC CACTATGTCT GAGAGGGGAA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320562100	CHEV_2_151909755	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251797312					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151925939 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12435	CpG island 12435	1348 bp distal
Rr567277	regulatory region 567277	436 bp distal
Rr567278	regulatory region 567278	193 bp proximal
Scrt2	scratch family zinc finger 2	Intron