rs251801858 SNP Detail

Summary

• ID
  rs251801858
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:23475935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCACAGGG CTGTTGTGAG
  GGCAAAGCAG GCACTGTTTT CACAAGTACA AAGTACTCTG CTACCTGAAG ATTTGCACAC
  ATCTAAATTA CCAATGCTAT TAGCTTCAAC ATATAGACAT ACATACACTT CACTAGACGA
  TGATCTTCGG ATGAGAAAAT TTTGCGAAAC CTTCAAGAAT GAAGCTACTG TTAACATAAA
  A
  ATGTAATATA AAATACTAAT AATTTTAATA TTTTCCAAAA TGTCATCTTC TTTATAATTT
  CTTGGGGCTT TTTAAACTTT TAATTAAGGA ATATATCATT CCCGTGTTCT GGGGGCTTTA
  TGTAAAAAAT AAATAGAACA TTAAGGTACT ACACTTTGAA ATTACCTCGT CTATGTATTC
  CTGGTAAATT GGAATTTTTA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324891330	CHEV_15_23405604	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251801858					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:23475935 () rs orientation: forward

Symbol	Name	Function Class
Cdh18	cadherin 18	1431 bp downstream
Cpgi6966	CpG island 6966	1629 bp distal
Gm56739	predicted gene, 56739	1114 bp downstream
Tssr130794	transcription start site region 130794	1391 bp downstream