rs251803557 SNP Detail

Summary

• ID
  rs251803557
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:150317928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             TCAGCGTCTG AGAGACAGAC TCCGCAAGCA CCGCAGTCAC CAAGGCGCCC
  W
  CCACATCCTC TCCCCCCACG CCTGACCATT CACGCCCCAC CTCAGGAGCT           
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320048301	CHEV_1_152289307	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251803557					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:150317928 () rs orientation: forward

Symbol	Name	Function Class
Rr372230	regulatory region 372230	1616 bp upstream
Rr420145	regulatory region 420145	245 bp distal
Tpr	translocated promoter region, nuclear basket protein	Coding-Synonymous