rs251845177 SNP Detail

Summary

• ID
  rs251845177
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:50844674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGTTGCA TATGTAGCAA
  AGAATGGCCT AGTCGGCCAT CAATGGGAGG AGACACCCTT GATATTGCGA AGATTATATG
  CCCCAGTACA GGGGAATGCC AGGACCAGGA AGTGGGAGTG GGTGGGTTGG GGAGCAGGGC
  GAGGGGAGGG TGTAGGGGAC TTTTGGGATA GCATTTGAAA AGTAAATGAA GAAAATATCT
  R
  ATAAAAAAAG ATTTATTTTT GCATTTGCAG ATATTTACTT TGAAATTATT GCACATTTAA
  AGAAAACGAA CAGTGCTATT ATAGTTCATC CACACACACT GTTTACATTC GCAATACTTA
  ATTGTCTCCT CAATTTTCTC TGCCATGATT TATTCCCTTC TCTCATCCTA TATATTTTTT
  TCTGGATCAT TTGTGAGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323299463	CHEV_10_50688384	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251845177					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:50844674 () rs orientation: forward

Symbol	Name	Function Class
Sim1	single-minded family bHLH transcription factor 1	within coordinates
Tssr93227	transcription start site region 93227	783 bp upstream