rs251922877 SNP Detail

Summary

• ID
  rs251922877
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58411819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCCAGTGA TACAAATGGA
  TTTTTAAAGC TTTTTATTTG GAAACAGCTT CAAAATTATT AAATGATAGG AAAAATAGAA
  CCAATAGGAG CTTCCTGCCT TGACTCTCCC GTCCTAGTAT TTTCCAATAA AGCAACATAT
  ATTCTAATAT ACAGATCTTG TTTGAAGCGG GTAGGGTAGA CCTGGGAGAA TTTAGGAAAG
  G
  AATGGGGAGA ATATGACCAA AGTACACATG CACAAAATTC CCATAGAATT AATAAAAATT
  GTACATTAAA AAGAAAAAAA GTGATTAGTA TCATAAAACT ATTTCATTTG TTGTGGTGGT
  GGTTTGAGAC TGCGTCTCTG CATACCAATG GGTGTCCTGG AGCTCTCTAG GAAGACCAGG
  CTGGCCTTAA GTTTCACAGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320783070	CHEV_3_58308320	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251922877					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58411819 () rs orientation: forward

Symbol	Name	Function Class
Gm66340	predicted gene, 66340	1049 bp upstream
Rr375034	regulatory region 375034	within coordinates
Rr577238	regulatory region 577238	458 bp distal