rs251948322 SNP Detail

Summary

• ID
  rs251948322
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79629372 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACC AGGCTAACCT CAAACTCAGA
  R
  ATCTGCCTAC CTCTGCCTCC CTAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324677539	CHEV_14_79791739	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251948322					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79629372 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6774	CpG island 6774	972 bp distal
Naa16	N(alpha)-acetyltransferase 16, NatA auxiliary subunit	1144 bp upstream
Rr404230	regulatory region 404230	986 bp downstream
Rr404231	regulatory region 404231	1496 bp upstream
Rr496090	regulatory region 496090	1165 bp distal
Rr496091	regulatory region 496091	1208 bp distal
Rr496092	regulatory region 496092	664 bp distal
Rr496093	regulatory region 496093	1120 bp distal
Rr496094	regulatory region 496094	1399 bp proximal
Tssr129901	transcription start site region 129901	1279 bp upstream
Tssr129902	transcription start site region 129902	1189 bp upstream