rs251958468 SNP Detail

Summary

• ID
  rs251958468
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:5678430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGAACAAT TGGGTCTGCT
  GTTCTTTCTT ATGAGCACTG GTCCTGACGT GTTATCAGTA CAGCAGCCAA CAATGCTATT
  GCTCAGTATA TCCTTTCTTC CACACTCTCG TGGTCCCAAC CACTTTCCCA CTCCACCCAA
  ACACTACTTC TTTAGCACAG TACTCACAAA GATAGGAAGT GTTTGTCCTC ATCACTCAGA
  Y
  ATCTATTTTT AAACTTGGGA TTTTTCCAAG CCTTCCTACT TCTTTGGTGA TAATATTCCA
  AATAAATCTG TTCTTTCTTA ATGGAATGTG ATTTGGTAAA ATTTAAGCAA CATGAAATAA
  CCTTGACTAA AAACTAAATG AATTTACTGT TTTCCAAAAT GCACCATTTC ATTAGTTTTA
  AGCTATTTAG ATATCTGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324222375	CHEV_13_5627677	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251958468					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:5678430 () rs orientation: forward

Symbol	Name	Function Class
Rr284365	regulatory region 284365	30 bp distal