rs251980049 SNP Detail

Summary

• ID
  rs251980049
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118689208 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTTTTGGG GACAAAGATC
  ACAAATGAGC CCATGTTATT TGTATGCTTA TTTACTAAAA GTCTAGATAA ACTGCTTATA
  ATCAATTACA TAGTGTTCCT GCAAACAACT GAAAACGTCA ATTTTTATTA AATGATCTAA
  TTCATGGACT TTGGTTTTAT AAAGGAGACT TCATTTCTAC CAATGAATAA ATGAATAAAT
  R
  GGTCTCGATA TTTAAAGCTT CTCAAATGTA GGAGGTAAGT AACCTGTTAT AGAAAGCAAG
  GAAAGACACG ATCTTTTAGT TTGTAAAAAC TGGTTTATTT ACAATTTGGT ATTTTAAAAC
  TGTATCTGAA ATGATATGTG TATATATATA TATACATATA TATATATATA TATATATATA
  TATATATATA TATATATACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323503902	CHEV_10_118290359	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251980049					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118689208 () rs orientation: forward

Symbol	Name	Function Class
Gm67702	predicted gene, 67702	within coordinates
Rr226050	regulatory region 226050	408 bp distal
Rr226051	regulatory region 226051	394 bp proximal