rs252006025 SNP Detail

Summary

• ID
  rs252006025
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156081734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAGATCTT ACTGTGTAGC
  CCTGGCTGGC CTTGGACTCA CAACTGGTCC ATCTGCTGCT GCTTGTCTGC TTGCTTGCTT
  GCTAGCCTGC TTTGTGGATT TTTAGAGACA TGATCTCTCT ATTAAATAGC CCTGGCTATC
  CTAGATTTTA ATATGTAGAC CAGCAGGCCT CTCTCTCTCA AATCCAGGGA CGGATAATGT
  S
  CACCGTCACA CCTGGCTCTA TCTCTGCTTT CTCAATGCTA GGATAATGGT TTCTGCAACC
  ATGTCTACCT TTTTTTTTTG TCTTATTAGG TTTTACATTT AATTATTTTT TGAAATGCAA
  GGACAATTTT ATTAGAGTTT GGAAGAAAAA TAACCCAGGG AGGACAAACT GAAAATCTCA
  GCAGTTGCCC TAACCCTAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321444439	CHEV_4_155371386	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252006025					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156081734 () rs orientation: forward

Symbol	Name	Function Class
Sdf4	stromal cell derived factor 4	within coordinates
Tssr40753	transcription start site region 40753	921 bp downstream