rs252026749 SNP Detail

Summary

• ID
  rs252026749
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:143655532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggattttgc acattaaatg aaggtaattt
  ataacattag ctgcttcaaa ggaaaaaatg ctttattcta attattttca ttttttcctt
  gtccagttct tatatttaca atagggtttg gaagtttact tgtctgaaag tgaaacatct
  K
  tttgtattat gaatactatt gcaaTGTTTT TGAAATGAAC TCACTGTCTA ACGTAGCCTT
  CACTGTGTTG ACACAGGTGT AGCAAGATAC AGATATCTTT GACAGGAGAG AAGTCTGGAG
  TATTTCTTCA TCTGTAATTA CTGCCTCATG                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320010614	CHEV_1_145626924	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252026749					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:143655532 () rs orientation: forward

Symbol	Name	Function Class
Cpgi837	CpG island 837	1734 bp distal
Gm25663	predicted gene, 25663	732 bp downstream
Gm29170	predicted gene 29170	within coordinates
Rr396353	regulatory region 396353	1426 bp downstream
Rr419946	regulatory region 419946	1433 bp distal
Uchl5	ubiquitin carboxyl-terminal esterase L5	within coordinates