rs252039106 SNP Detail

Summary

• ID
  rs252039106
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:57922586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTG AAGAAGGGGG TCCTCATCCT
  T
  GGGTGGACTG TGATTTGTAG GTCTC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321136030	CHEV_4_57935458	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252039106					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:57922586 () rs orientation: forward

Symbol	Name	Function Class
Gm42292	predicted gene, 42292	within coordinates
Gm52700	predicted gene, 52700	918 bp downstream
Rr94514	regulatory region 94514	15 bp proximal
Rr98485	regulatory region 98485	116 bp distal
Rr376550	regulatory region 376550	1106 bp downstream